| Enzyme Function: | pectin lyase |
| Accession number: | AN2331.2 |
| GenBank ID: | DQ490478 |
| FGSC number: | 10076 |
| Average molecular weight (clone, calculated): | 43.195 kDa |
| AA length (clone): | 407 aa |
| DNA length (clone): | 1224 bp |
| DNA source: | xylan cDNA |
| DNA Sequence (clone): | TCGATGAATTCACGTGATATGAAGACCACTTTCCTCGTTTCCCTGGCCAC CGCTGCCCTCAGCAGCACCGCCGCCGCCGTCTCCGTCAGCGGCTCGGCCG AGGGTTTCGCCAAGGGTGTGACCGGCGGTGGTAGTGCCACAGCCGTCTAC CCAGACACCATCGACGAGCTGGTCTCGTACCTGGGAGACGACGAGGCCCG CGTCATTGTCCTCTCTAAGACCTTCGACTTCACCGACAGTGAAGGCACGA CCACCGAAACCGGTTGCGCACCTTGGGGCACCGACGCGGCGTGCCAGGTC GCGATTAACCAGAATGACTGGTGCACAAACTACCAGCCTGACGCTCCCTC CGTCTCGGTGACCTACGACAATGCCGGAACCCTCGGTATCACCGTTAACT CGGACAAAACGCTTATCGGCGAGGGCTCCGCCGGTGTGATCAAGGGCAAG GGTCTGCGCCTTGTTAGCGGAACCAGCAATGTCATCATCCAAAACATCGC CATTACTGATATCAACCCCAAGTACGTCTGGGGAGGTGACGCCATCACTC TGAACGACGTGGATATGGTCTGGATCGACCACGTTACTACCGCTCGCATT GCTCGTCAGCACATCGTCCTCGGCACCGAAGCCGACAACCGCGTGACCAT CTCCAACTCGTTCATCAACGGTGAATCCGACTACTCGGCCACTTGCGATG GTTACCACTACTGGGGTATCTACCTCGACGGCTCCAGCGACATGGTCACC ATGAAGGGCAACTACATCTACCACACCAGCGGTCGTAGTCCCAAGGTCCA GGGTAACACTCTGCTGCACGCTGTCAACAACTACTGGCACGACAACTCTG ATCACGCCTTCGAGATCGGTGAGGGTGCCTACGTGCTCGCTGAAGGAAAC GTTTTCCAGAACATCCCCACCGTGGCCGAGGACCCCATTGAGGGTGAGCT CTTCGCTTCTCCCTCCGAATCTGCCAACGAGGTTTGCTCGACTTACCTTG GCCGTGTTTGCGAGCTCAACGGGTTCGGCAGCTCTGGCACCTTCAACCAG GCCGACACCGATTTCCTCAGCAAGTTCGAGGGCAAGAACATCGCATCCGC CGACTCCTACAGCAGCGTCGCTTCTAGTGTCGCCTCTTCTGCCGGTAACA CCCTTCTAGAACAAAAACTCATCTCAGAAGAGGATCTGAATAGCGCCGTC GACCATCATCATCATCATCATTGA |
| Amino Acid Sequence (clone): | SMNSRDMKTTFLVSLATAALSSTAAAVSVSGSAEGFAKGVTGGGSATAVY PDTIDELVSYLGDDEARVIVLSKTFDFTDSEGTTTETGCAPWGTDAACQV AINQNDWCTNYQPDAPSVSVTYDNAGTLGITVNSDKTLIGEGSAGVIKGK GLRLVSGTSNVIIQNIAITDINPKYVWGGDAITLNDVDMVWIDHVTTARI ARQHIVLGTEADNRVTISNSFINGESDYSATCDGYHYWGIYLDGSSDMVT MKGNYIYHTSGRSPKVQGNTLLHAVNNYWHDNSDHAFEIGEGAYVLAEGN VFQNIPTVAEDPIEGELFASPSESANEVCSTYLGRVCELNGFGSSGTFNQ ADTDFLSKFEGKNIASADSYSSVASSVASSAGNTLLEQKLISEEDLNSAV DHHHHHH |
| Primers Used (Restriction sites): | GAAAGCACGTGATATGAAGACCACTTTCCTCG (Pml I) TACAGTCTAGAAGGGTGTTACCGGCAGAA (Xba I) |
| pH optimum: | 7.0 |
| Specific activity (Substrate): | citrus pectin |
| T optimum: | n.d. |
| ph Range Link: | Link |
| Temperature Link: | Link |
| Optimal Expression Medium: | BMMY |
| Description: | active on citrus pectin produces GalA oligomers with unsaturated methyl esterified GalA at the NR end |
| References: | not yet available |
pectin lyase